(used for mutation description)
(last modified October 6, 2009)
This file was created to facilitate the description of sequence variants in the COL5A1 gene based on a coding DNA reference sequence following the HGVS recommendations.
(upstream sequence)
. . g.5022
cgcactctccgtccccgcggct c.-361
. . . . . . g.5082
ggcgcaggacctcactcgagcggagcgcccacggggagcgggtcgcggggcggcggcggc c.-301
. . . . . . g.5142
gaggaggaggcgagaaggagttggaggaggaggaggaggaggcgagggcgagctagccca c.-241
. . . . . . g.5202
gcggggtcccggccgccccgcgggccaaagtcgagccctcccgcccgtgggcgagcgcgc c.-181
. . . . . . g.5262
cagccgccccttccagaacagccgccgccacaaagaagaacggggggtgccgaggtcccc c.-121
. . . . . . g.5322
atgacctcctaaagtggtgcggtccctgctgagtgcgctgcccgggccgtgacccgcgcc c.-61
. . . . . . g.5382
cctgtgcgtccccgcgcgcctccgagcgcccctgtgcgccccggcccgcgccccgccggc c.-1
. . . . . . g.5442
ATGGACGTCCATACCCGCTGGAAAGCGCGCAGCGCGCTCCGCCCGGGCGCCCCGCTGCTG c.60
M D V H T R W K A R S A L R P G A P L L p.20
. . . . | 02 . g.54117
CCCCCGCTGCTGCTGCTGCTGCTGTGGGCGCCGCCTCCGAGCCGCGCAG | CTCAGCCAGCA c.120
P P L L L L L L W A P P P S R A A | Q P A p.40
. . . . . . g.54177
GATCTCCTGAAGGTTCTAGATTTTCACAACTTGCCTGATGGAATAACAAAGACAACAGGC c.180
D L L K V L D F H N L P D G I T K T T G p.60
. . . . . . g.54237
TTTTGCGCCACGCGGCGATCTTCCAAAGGCCCGGATGTCGCTTACAGAGTCACCAAAGAC c.240
F C A T R R S S K G P D V A Y R V T K D p.80
. . . | 03. . . g.63126
GCGCAGCTCAGCGCACCCACCAAGCAGCTGTACCCTG | CGTCTGCATTTCCCGAGGACTTC c.300
A Q L S A P T K Q L Y P A | S A F P E D F p.100
. . . . . . g.63186
TCCATCCTAACAACTGTGAAAGCCAAGAAAGGCAGCCAGGCCTTCCTGGTCTCCATCTAC c.360
S I L T T V K A K K G S Q A F L V S I Y p.120
. . . . . . g.63246
AACGAGCAGGGTATCCAGCAGATTGGGCTGGAGCTGGGCCGCTCTCCCGTCTTCCTCTAC c.420
N E Q G I Q Q I G L E L G R S P V F L Y p.140
. . . . . . g.63306
GAGGACCACACGGGGAAGCCTGGCCCGGAAGACTACCCCCTCTTCCGGGGCATCAACCTG c.480
E D H T G K P G P E D Y P L F R G I N L p.160
. | 04 . . . . . g.64414
TCAGATGGCAA | GTGGCACAGAATTGCTCTCAGCGTCCACAAGAAAAATGTCACCTTGATC c.540
S D G K | W H R I A L S V H K K N V T L I p.180
. . . . . . g.64474
CTCGACTGTAAAAAGAAGACCACCAAATTCCTCGACCGCAGCGACCACCCCATGATCGAC c.600
L D C K K K T T K F L D R S D H P M I D p.200
. . . . . | 05 . g.90466
ATCAATGGCATCATCGTGTTTGGCACCCGGATCCTGGATGAGGAGGTGTTTGAG | GGTGAC c.660
I N G I I V F G T R I L D E E V F E | G D p.220
. . . . . . g.90526
ATCCAGCAGCTGCTCTTTGTCTCGGACCACCGGGCAGCTTATGATTACTGTGAGCACTAC c.720
I Q Q L L F V S D H R A A Y D Y C E H Y p.240
. . . . . . g.90586
AGCCCTGACTGTGACACCGCAGTACCTGACACCCCACAGTCGCAGGACCCCAATCCAGAT c.780
S P D C D T A V P D T P Q S Q D P N P D p.260
| 06 . . . . . . g.91918
GAATAT | TACACGGAAGGAGACGGCGAGGGTGAGACCTATTACTACGAATACCCCTACTAC c.840
E Y | Y T E G D G E G E T Y Y Y E Y P Y Y p.280
. . . . . . g.91978
GAAGACCCCGAAGACCTAGGGAAGGAGCCCACCCCCAGCAAGAAGCCCGTGGAAGCTGCC c.900
E D P E D L G K E P T P S K K P V E A A p.300
. . | 07 . . . . g.93466
AAAGAAACCACAGAGGTCCCCGAG | GAGCTGACCCCGACCCCCACGGAAGCTGCTCCCATG c.960
K E T T E V P E | E L T P T P T E A A P M p.320
. . . . . . g.93526
CCTGAAACCAGTGAAGGGGCTGGGAAGGAAGAGGACGTCGGCATCGGGGACTATGACTAC c.1020
P E T S E G A G K E E D V G I G D Y D Y p.340
. . . . . . g.93586
GTGCCCAGTGAGGACTACTACACGCCCTCACCGTATGATGACCTCACCTATGGCGAGGGG c.1080
V P S E D Y Y T P S P Y D D L T Y G E G p.360
. . . . . . g.93646
GAGGAGAACCCCGACCAGCCCACAGACCCAGGCGCTGGGGCCGAAATTCCCACCAGCACC c.1140
E E N P D Q P T D P G A G A E I P T S T p.380
. . | 08 . . . . g.94726
GCCGACACCTCCAACTCCTCCAAT | CCAGCTCCGCCTCCAGGGGAAGGTGCGGATGACTTG c.1200
A D T S N S S N | P A P P P G E G A D D L p.400
. . . . . . g.94786
GAGGGGGAGTTCACTGAGGAAACGATCCGGAACCTTGACGAGAACTACTACGACCCCTAC c.1260
E G E F T E E T I R N L D E N Y Y D P Y p.420
. . . . . . g.94846
TACGACCCCACCAGCTCCCCGTCGGAGATCGGGCCGGGAATGCCGGCGAACCAGGATACC c.1320
Y D P T S S P S E I G P G M P A N Q D T p.440
. | 09 . . . . . g.95313
ATCTATGAAGGG | ATTGGAGGACCTCGGGGCGAGAAAGGCCAAAAGGGAGAACCAGCGATT c.1380
I Y E G | I G G P R G E K G Q K G E P A I p.460
| 10 . . . . | 11 . g.101949
ATCGAGCCG | GGCATGCTCATCGAGGGCCCGCCTGGCCCAGAAGGCCCCGCG | GGTCTTCCC c.1440
I E P | G M L I E G P P G P E G P A | G L P p.480
. . . . . | 12 . g.113742
GGACCTCCAGGAACCATGGGTCCCACTGGCCAAGTCGGGGACCCTGGAGAAAGG | GGCCCC c.1500
G P P G T M G P T G Q V G D P G E R | G P p.500
. . . . . . g.113802
CCTGGACGCCCAGGCCTTCCTGGGGCCGATGGCCTGCCCGGTCCTCCAGGAACCATGCTC c.1560
P G R P G L P G A D G L P G P P G T M L p.520
| 13 . . . . . g.114035
ATGCTGCCC | TTCCGGTTTGGAGGTGGCGGCGATGCGGGCTCCAAAGGCCCCATGGTCTCA c.1620
M L P | F R F G G G G D A G S K G P M V S p.540
. . . . | 14 . . g.115801
GCCCAGGAGTCCCAGGCGCAAGCCATTCTCCAGCAGGCCAGG | TTGGCACTGAGGGGACCA c.1680
A Q E S Q A Q A I L Q Q A R | L A L R G P p.560
. . . | 15 . . g.117065
GCTGGCCCGATGGGTCTCACAGGGAGACCTGGCCCTGTG | GGTCCCCCTGGGAGCGGAGGT c.1740
A G P M G L T G R P G P V | G P P G S G G p.580
. . . | 16 . . . g.117494
TTGAAGGGCGAGCCGGGAGACGTGGGGCCTCAG | GGTCCTCGAGGTGTGCAAGGCCCGCCT c.1800
L K G E P G D V G P Q | G P R G V Q G P P p.600
. . | 17. . . . g.119992
GGTCCGGCCGGGAAGCCCGGAAGACGG | GGTCGGGCTGGGAGTGATGGAGCCAGAGGAATG c.1860
G P A G K P G R R | G R A G S D G A R G M p.620
. . | 18 . . . . g.121476
CCTGGACAAACTGGCCCCAAG | GGTGACCGGGGTTTCGACGGCCTGGCTGGGTTGCCAGGC c.1920
P G Q T G P K | G D R G F D G L A G L P G p.640
. | 19 . . . . . g.125164
GAGAAGGGCCACAGG | GGTGACCCTGGTCCTTCCGGCCCACCAGGACCTCCGGGAGACGAT c.1980
E K G H R | G D P G P S G P P G P P G D D p.660
| 20 . . . . | 21 . g.128881
GGAGAAAGG | GGTGACGACGGAGAAGTTGGGCCCAGGGGGCTGCCTGGGGAGCCC | GGGCCA c.2040
G E R | G D D G E V G P R G L P G E P | G P p.680
. . . . | 22 . g.129660
CGTGGTCTGCTTGGGCCGAAGGGGCCCCCAGGTCCTCCCGGACCTCCC | GGTGTCACGGGT c.2100
R G L L G P K G P P G P P G P P | G V T G p.700
. . . | 23 . . . g.130221
ATGGACGGCCAGCCGGGGCCAAAAGGAAATGTG | GGTCCCCAGGGAGAGCCTGGCCCCCCA c.2160
M D G Q P G P K G N V | G P Q G E P G P P p.720
. . | 24. . . . g.130537
GGACAGCAGGGTAATCCAGGCGCCCAG | GGTCTTCCAGGCCCCCAGGGTGCAATTGGTCCT c.2220
G Q Q G N P G A Q | G L P G P Q G A I G P p.740
. | 25 . . . . . g.131652
CCAGGAGAAAAG | GGTCCCTTGGGGAAACCAGGCCTTCCAGGAATGCCCGGTGCTGACGGA c.2280
P G E K | G P L G K P G L P G M P G A D G p.760
| 26 . . . . . | 27 . g.138062
CCCCCG | GGACACCCTGGCAAAGAAGGCCCTCCAGGAGAGAAAGGAGGTCAG | GGTCCACCT c.2340
P P | G H P G K E G P P G E K G G Q | G P P p.780
. . . . | 28 . . g.143311
GGCCCCCAGGGTCCGATTGGCTACCCAGGTCCTCGAGGAGTCAAG | GGGGCCGATGGCATC c.2400
G P Q G P I G Y P G P R G V K | G A D G I p.800
. . . | 29 . . . g.145891
CGTGGTCTGAAGGGCACAAAGGGCGAGAAG | GGTGAAGACGGCTTTCCTGGGTTTAAAGGA c.2460
R G L K G T K G E K | G E D G F P G F K G p.820
. . | 30 . . . . g.148219
GACATGGGCATCAAGGGTGATCGG | GGGGAGATCGGCCCACCCGGTCCCAGGGGAGAAGAT c.2520
D M G I K G D R | G E I G P P G P R G E D p.840
. . . . . . g.148279
GGCCCTGAAGGCCCAAAGGGTCGCGGAGGTCCCAATGGTGACCCCGGTCCTCTGGGACCC c.2580
G P E G P K G R G G P N G D P G P L G P p.860
. | 31 . . . . . g.149237
CCTGGGGAGAAG | GGAAAACTCGGAGTCCCAGGGTTACCAGGGTATCCAGGAAGACAAGGA c.2640
P G E K | G K L G V P G L P G Y P G R Q G p.880
| 32 . . . . . . g.152403
CCAAAG | GGCTCTATTGGATTCCCTGGATTTCCTGGCGCCAATGGAGAGAAGGGCGGCAGG c.2700
P K | G S I G F P G F P G A N G E K G G R p.900
| 33 . . . . | 34 . . g.158471
| GGGACCCCTGGAAAGCCAGGACCGCGGGGGCAGCGAGGCCCAACG | GGTCCGAGGGGTGAA c.2760
| G T P G K P G P R G Q R G P T | G P R G E p.920
. . . | 35 . . g.159589
AGAGGCCCCCGGGGCATCACTGGGAAGCCTGGCCCCAAG | GGCAACTCCGGAGGTGACGGC c.2820
R G P R G I T G K P G P K | G N S G G D G p.940
. . | 36 . . . . g.160078
CCAGCTGGCCCTCCTGGTGAACGG | GGACCCAATGGACCCCAAGGACCCACAGGATTTCCT c.2880
P A G P P G E R | G P N G P Q G P T G F P p.960
. | 37 . . . . g.161644
GGACCAAAGGGCCCCCCT | GGCCCTCCAGGCAAGGATGGACTCCCAGGACACCCTGGACAG c.2940
G P K G P P | G P P G K D G L P G H P G Q p.980
. | 38 . . . . . g.165196
AGAGGCGAGACT | GGTTTCCAAGGCAAGACCGGCCCTCCAGGCCCCCCCGGCGTGGTCGGC c.3000
R G E T | G F Q G K T G P P G P P G V V G p.1000
| 39 . . . . . . g.166136
CCTCAG | GGTCCCACGGGAGAAACGGGCCCAATGGGTGAGCGTGGCCACCCTGGGCCCCCT c.3060
P Q | G P T G E T G P M G E R G H P G P P p.1020
. . . . . | 40 . g.168175
GGACCCCCCGGTGAACAGGGGCTTCCGGGCCTTGCTGGAAAAGAAGGGACGAAG | GGTGAC c.3120
G P P G E Q G L P G L A G K E G T K | G D p.1040
. . . . . . g.168235
CCAGGCCCTGCAGGCCTCCCTGGGAAAGATGGCCCTCCAGGATTACGTGGTTTCCCTGGG c.3180
P G P A G L P G K D G P P G L R G F P G p.1060
. . | 41 . . . . g.168391
GACCGAGGGCTTCCTGGTCCAGTG | GGAGCTCTTGGACTGAAAGGCAATGAAGGGCCCCCT c.3240
D R G L P G P V | G A L G L K G N E G P P p.1080
. | 42 . . . . g.169425
GGCCCACCAGGCCCTGCG | GGATCTCCAGGGGAGAGAGGTCCAGCTGGAGCCGCTGGGCCC c.3300
G P P G P A | G S P G E R G P A G A A G P p.1100
. . . . . . g.169485
ATCGGAATTCCAGGGAGACCTGGGCCCCAGGGACCCCCAGGGCCGGCAGGAGAGAAAGGG c.3360
I G I P G R P G P Q G P P G P A G E K G p.1120
| 43 . . . . . . g.172431
GCTCCT | GGCGAGAAAGGCCCACAAGGCCCAGCTGGCCGAGACGGTCTCCAGGGGCCTGTG c.3420
A P | G E K G P Q G P A G R D G L Q G P V p.1140
. . . . . | 44 . g.173455
GGGCTCCCGGGTCCAGCTGGCCCTGTGGGTCCCCCTGGAGAAGACGGAGATAAG | GGAGAG c.3480
G L P G P A G P V G P P G E D G D K | G E p.1160
. . . . | 45 . g.174545
ATCGGGGAGCCGGGGCAGAAAGGAAGCAAGGGGGACAAAGGAGAACAG | GGTCCTCCTGGG c.3540
I G E P G Q K G S K G D K G E Q | G P P G p.1180
. . . . | 46 . . g.174704
CCTACAGGTCCTCAAGGCCCCATCGGACAGCCAGGCCCCTCT | GGAGCTGACGGCGAGCCG c.3600
P T G P Q G P I G Q P G P S | G A D G E P p.1200
. . . . . . g.174764
GGGCCTCGGGGCCAGCAGGGCCTTTTCGGGCAGAAAGGTGATGAAGGTCCCAGAGGCTTT c.3660
G P R G Q Q G L F G Q K G D E G P R G F p.1220
. . . | 47 . . . g.175673
CCTGGACCCCCTGGGCCAGTGGGGCTGCAG | GGTTTGCCAGGACCTCCAGGCGAGAAGGGT c.3720
P G P P G P V G L Q | G L P G P P G E K G p.1240
. . | 48 . . . . g.175835
GAGACAGGAGACGTGGGCCAGATG | GGCCCCCCGGGTCCCCCTGGCCCCCGAGGACCCTCC c.3780
E T G D V G Q M | G P P G P P G P R G P S p.1260
. . . . . . g.175895
GGAGCTCCAGGTGCTGATGGCCCACAAGGTCCCCCAGGTGGAATAGGAAACCCTGGTGCA c.3840
G A P G A D G P Q G P P G G I G N P G A p.1280
. | 49 . . . . . g.177225
GTGGGAGAGAAG | GGCGAGCCTGGCGAAGCAGGTGAGCCTGGCCTTCCGGGAGAAGGCGGC c.3900
V G E K | G E P G E A G E P G L P G E G G p.1300
| 50 . . . . . . g.178045
CCCCCG | GGACCCAAAGGAGAAAGGGGAGAGAAGGGCGAGTCAGGCCCTTCAGGTGCTGCC c.3960
P P | G P K G E R G E K G E S G P S G A A p.1320
. . . . . | 51 . g.178776
GGACCCCCTGGACCCAAAGGCCCTCCCGGAGATGATGGTCCCAAAGGCAGCCCT | GGCCCA c.4020
G P P G P K G P P G D D G P K G S P | G P p.1340
. . . . | 52 . g.179141
GTGGGTTTTCCTGGAGATCCTGGCCCCCCCGGAGAGCCTGGCCCCGCG | GGTCAAGATGGT c.4080
V G F P G D P G P P G E P G P A | G Q D G p.1360
. . . . | 53 . . g.180238
CCCCCTGGTGACAAAGGAGATGATGGTGAACCCGGGCAGACG | GGATCCCCCGGCCCTACT c.4140
P P G D K G D D G E P G Q T | G S P G P T p.1380
. . . | 54 . . . g.180996
GGTGAACCAGGTCCATCGGGGCCTCCAGGAAAAAGG | GGTCCCCCAGGCCCCGCAGGCCCC c.4200
G E P G P S G P P G K R | G P P G P A G P p.1400
. . . | 55 . . . g.181880
GAAGGCAGACAGGGAGAGAAAGGGGCCAAG | GGAGAAGCCGGCTTGGAAGGCCCTCCTGGG c.4260
E G R Q G E K G A K | G E A G L E G P P G p.1420
. . . . . . g.181940
AAGACTGGCCCCATCGGCCCCCAGGGGGCCCCTGGGAAGCCCGGACCGGATGGCCTTCGA c.4320
K T G P I G P Q G A P G K P G P D G L R p.1440
. | 56 . . . . g.182084
GGGATCCCTGGCCCTGTG | GGAGAACAAGGTCTCCCAGGATCCCCAGGCCCGGACGGTCCC c.4380
G I P G P V | G E Q G L P G S P G P D G P p.1460
. | 57 . . . . . g.182242
CCCGGCCCCATG | GGTCCCCCAGGACTTCCCGGCCTCAAAGGAGATTCTGGTCCCAAAGGT c.4440
P G P M | G P P G L P G L K G D S G P K G p.1480
| 58 . . . . . . g.183364
GAAAAG | GGTCATCCAGGCCTGATCGGGCTCATCGGTCCTCCGGGTGAACAGGGTGAGAAG c.4500
E K | G H P G L I G L I G P P G E Q G E K p.1500
. . . . . | 59 . g.185297
GGCGACCGTGGTCTCCCTGGCCCCCAGGGCTCCTCCGGTCCTAAGGGAGAACAG | GGTATC c.4560
G D R G L P G P Q G S S G P K G E Q | G I p.1520
. . . . | 60 . g.186204
ACTGGTCCTTCTGGCCCGATTGGGCCTCCTGGGCCCCCTGGCCTGCCG | GGTCCGCCTGGT c.4620
T G P S G P I G P P G P P G L P | G P P G p.1540
. . | 61 . . . . g.186646
CCAAAAGGTGCTAAGGGCTCCTCG | GGTCCAACTGGCCCGAAGGGTGAGGCAGGCCACCCA c.4680
P K G A K G S S | G P T G P K G E A G H P p.1560
. | 62 . . . . g.187836
GGACCCCCAGGCCCCCCG | GGCCCCCCGGGAGAGGTCATCCAGCCCCTGCCAATCCAGGCA c.4740
G P P G P P | G P P G E V I Q P L P I Q A p.1580
. . . . . . g.187896
TCCAGGACGCGGCGGAACATCGACGCCAGCCAGCTGCTGGACGACGGGAATGGCGAGAAC c.4800
S R T R R N I D A S Q L L D D G N G E N p.1600
. . . . . . g.187956
TACGTGGACTACGCGGACGGCATGGAAGAGATCTTCGGCTCTCTCAACTCTCTGAAGCTG c.4860
Y V D Y A D G M E E I F G S L N S L K L p.1620
. . . . . . g.188016
GAGATTGAGCAGATGAAACGGCCCCTGGGCACGCAGCAGAACCCCGCCCGCACCTGCAAG c.4920
E I E Q M K R P L G T Q Q N P A R T C K p.1640
. . . | 63 . . . g.189012
GACCTGCAGCTCTGCCACCCCGACTTCCCAGATG | GTGAATACTGGGTCGATCCTAACCAA c.4980
D L Q L C H P D F P D G | E Y W V D P N Q p.1660
. . . . . . g.189072
GGATGCTCCAGGGATTCCTTCAAGGTTTACTGCAACTTCACAGCCGGGGGGTCGACATGC c.5040
G C S R D S F K V Y C N F T A G G S T C p.1680
. . | 64. . . . g.193203
GTCTTCCCTGACAAGAAGTCCGAAGGG | GCCAGAATCACTTCTTGGCCCAAAGAAAACCCG c.5100
V F P D K K S E G | A R I T S W P K E N P p.1700
. . . | 65 . . . g.198189
GGCTCCTGGTTCAGTGAATTCAAGCGTGGGAAACTG | CTCTCCTATGTGGACGCCGAGGGC c.5160
G S W F S E F K R G K L | L S Y V D A E G p.1720
. . . . . . g.198249
AACCCTGTGGGTGTGGTACAGATGACCTTCCTGCGGCTGCTGAGCGCCTCTGCCCACCAG c.5220
N P V G V V Q M T F L R L L S A S A H Q p.1740
. . . . . . g.198309
AACGTCACCTACCACTGCTACCAGTCAGTGGCCTGGCAGGACGCAGCCACGGGCAGCTAC c.5280
N V T Y H C Y Q S V A W Q D A A T G S Y p.1760
. . . . . . g.198369
GACAAGGCCCTCCGCTTCCTGGGCTCCAACGACGAGGAGATGTCCTATGACAACAACCCC c.5340
D K A L R F L G S N D E E M S Y D N N P p.1780
. . . | 66 . . . g.205381
TACATCCGCGCCCTGGTGGACGGCTGTGCT | ACCAAGAAAGGCTACCAGAAGACGGTTCTG c.5400
Y I R A L V D G C A | T K K G Y Q K T V L p.1800
. . . . . . g.205441
GAGATCGACACCCCCAAAGTGGAGCAGGTGCCCATCGTGGACATCATGTTCAATGACTTC c.5460
E I D T P K V E Q V P I V D I M F N D F p.1820
. . . . . g.205498
GGTGAAGCGTCACAGAAATTTGGATTTGAAGTGGGGCCGGCTTGCTTCATGGGCTAG c.5517
G E A S Q K F G F E V G P A C F M G X p.1838
. . . . . . g.205558
gagccgccgagcccgggctcccgagagcaacctcgtgacctcagcatgccattcgttcgt c.*60
. . . . . . g.205618
gagtgtcccgtgcacgtcctgaccctggacagtgaaggcttctccctcccctcccacctg c.*120
. . . . . . g.205678
acttcatctacgcctcggcaccacggggtgtgggaccccagcccggagagaacagaggga c.*180
. . . . . . g.205738
aggagccgcgcccccacctggagctgaatcacatgacctagctgcaccccagcgcctggg c.*240
. . . . . . g.205798
cccgccccacgctctgtccacacccacgcgccccgggagcggggccatgcctccagcccc c.*300
. . . . . . g.205858
ccagctcgcccgacccatcctgttcgtgaataggtctcaggggttgggggagggactgcc c.*360
. . . . . . g.205918
agatttggacactatatttttttctaaattcaacttgaagatgtgtatttcccctgacct c.*420
. . . . . . g.205978
tcaaaaaatgttccaaggtaagcctcgtaaaggtcatcccaccatcaccaaagcctccgt c.*480
. . . . . . g.206038
ttttaacaacctccaacacgatccatttagaggccaaatgtcattctgcaggtgccttcc c.*540
. . . . . . g.206098
cgatggattaaaggtgcttatgtttttgtgagttttaagtaaatatttgtattgtattgt c.*600
. . . . . . g.206158
tataaatgttaagtgtgcctggctttcaatcatgcacggaaacccagtctcagtcccacg c.*660
. . . . . . g.206218
gacagaatgggcgaggcatggattctgggttgcagtaccgttctgattagaaataggaag c.*720
. . . . . . g.206278
tctccccacccccgccctggccaagaacgtgcaataaattggaagtttgccccggggcag c.*780
. . . . . . g.206338
caagaatttatgctgccattgaaaagcaggtaccagtgccccttttcagacagtttttga c.*840
. . . . . . g.206398
ttcgctctagactttttttttttttaatagggaaaaaatttgataattttcttttttcta c.*900
. . . . . . g.206458
catgcacttaagactaaaacacaggtttggattaattttatttgcttcctttttccgctt c.*960
. . . . . . g.206518
ttcttcccgcagagcctgatgggagaatgtccagggcagggaaaccacattttttgtagg c.*1020
. . . . . . g.206578
tgataactcaatgaaaattggtgcttattttttacacttctctcttgtggctctcttgtg c.*1080
. . . . . . g.206638
gtgctatctatctgttttaaggtctccttgaaggcgcactggggaccctggccatgcctc c.*1140
. . . . . . g.206698
gttctccctgctttctttatcctgttattgcctccacagtctgttgccaaggactctaag c.*1200
. . . . . . g.206758
atcaatgcacgtcactttcctttccactgggcaggatagccaagcacactccctcctgcg c.*1260
. . . . . . g.206818
ctctcccgccccggtgcgtccactcccgagggctgttatgaggactgggttgtgcctact c.*1320
. . . . . . g.206878
tgatttgaaaacacacacaagcaataaaaagcctcttcctgcattgtctgtggtgtgacc c.*1380
. . . . . . g.206938
atagcagattatatttggttcctgaatgtttgtggtgctaatttctgtgtttgttccaag c.*1440
. . . . . . g.206998
ccgttcagtcatgccatgcgctgcctcggtagatggagtaatgtacaatgaactccatga c.*1500
. . . . . . g.207058
gtctctccagggctgcctgcagcacgtcttttccaagtagcctatttggattcccatctc c.*1560
. . . . . . g.207118
aaatgtcctggatgcgagcgtcagcggctccagagctcggggcgggtgaggtcccctttg c.*1620
. . . . . . g.207178
gggaaccctttcctggccatcgaggtcggggggctgccgtctgtgggcaggaggacccga c.*1680
. . . . . . g.207238
ggggcagccaggaaaggcgatctcttcactgtgaaaagttgcccgggtgcagcgcctttt c.*1740
. . . . . . g.207298
ccttctaccatgggaaatgcaggctgggcccttggggtgagcctgcggggctctggtgct c.*1800
. . . . . . g.207358
gtccccgacccccaccaccaccagaatgcagttccagcttaggaagccacaaacaagcca c.*1860
. . . . . . g.207418
cccaggaggaacaaaacaccgccagcgtggattttccaaatttccctggaaagtaagtct c.*1920
. . . . . . g.207478
cgctcttgccaaagaaaagtctggcttggagagtctctggagcccaggatgccagcatgt c.*1980
. . . . . . g.207538
gccaatgactgtcaccttcatctcttcaaaagaaaagccatagccgaggactgtcccgcg c.*2040
. . . . . . g.207598
acccccgtggactgcgtctaggtcatgtgattctgttttcatttctcatcccatccaatt c.*2100
. . . . . . g.207658
tgtccttttctcctgtcattttcttcctctgtggtcccttcaaagttgttataatttgta c.*2160
. . . . . . g.207718
ctgaacttcaaaatgtgtcccgttctccccagaccactctagccacagtatattgcaata c.*2220
. . . . . . g.207778
aaattacttcttatatttgcagaaattcttttggtgtaattttattttttcctctcaata c.*2280
. . . . . . g.207838
tatataattggacaaacgctggcaaaaagaaaaaaatggtaagcaaaaaacccaagataa c.*2340
. . . . . . g.207898
agtttcgaggacatcaggccttttgaaatacaatgtcaaatgacacattgtacggtttca c.*2400
. . . . . . g.207958
aaaaatccgctagacatgtcataagttttaactgtaatgcccaggaaaggatatcttaaa c.*2460
. . . . . . g.208018
atattctaaacttgtgtaacaaaggaataattaactgtaatagtttttcaataaatcgag c.*2520
. . g.208038
ttgggtgtttccaccgtaaa c.*2540
(downstream sequence)
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